The main objective of this project is to enable the wider application of genomics and the development of various tools to achieve its use in ecosystem management. This new management methods will give scientists better access to conservation issues. The focus will be on the development of common protocols for monitoring genetic diversity within species, especially for the management of species and ecosystems within the Habitats Directive and Natura 2000 networks. The first step will be to find such genetic indicators. The second step will be to validate monitoring protocols against these indicators. We will include models and protocols for integrating genetic diversity into existing EU biodiversity protocols and other systems such as European Red List and IUCN National Red Lists, Important Biodiversity Areas, Natura 2000 monitoring, CBD and Objective 13 that will ensure the widest possible application of the results of the action. We will provide information and guidance on the use of new biotechnology tools for conservation issues such as control of invasive species and alien species and/or diseases. We also aim to expand thinking on the topic of genes for ecosystems by identifying practical situations where genetic diversity is most likely to have consequences and impacts beyond those of a single species, such as ecosystem functioning or resilience. The currently available literature will provide an overview of this area, and the results will be summarized and made available. Finally, we will publish the results in scientific publications, but also in easy-to-understand summaries for those working in this field, with an overview of key points, frequently asked questions and agreed best practices.